Package: PhysMove 1.2.5
PhysMove: Quantifying Animal Movement and Space-Use Patterns with Statistical Physics
Provides tools to analyse animal movement and space-use patterns from telemetry data using methods derived from statistical physics. Methods span displacement-based approaches, distribution fitting, space-use metrics (including the influence of correlations on space-use), network-based community detection, and measures of entropy and predictability. The package enables characterisation of these patterns across spatial and temporal scales, including variation within and among individuals (inter- and intraspecific analyses). Outputs include interpretable metrics and visualisations to support ecological analysis and the investigation of fundamental movement processes. For applications of these methods in ecological studies see Rodríguez et al. (2017) <doi:10.1038/s41598-017-00165-0> and Sequeira et al. (2018) <doi:10.1073/pnas.1716137115>.
Authors:
PhysMove_1.2.5.tar.gz
PhysMove_1.2.5.zip(r-4.7-any)PhysMove_1.2.5.zip(r-4.6-any)PhysMove_1.2.5.zip(r-4.5-any)
PhysMove_1.2.5.tgz(r-4.6-any)PhysMove_1.2.5.tgz(r-4.5-any)
PhysMove_1.2.5.tar.gz(r-4.7-any)PhysMove_1.2.5.tar.gz(r-4.6-any)
PhysMove_1.2.5.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
PhysMove/json (API)
| # Install 'PhysMove' in R: |
| install.packages('PhysMove', repos = c('https://hannahcalich.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/hannahcalich/physmove/issues
- angleList - Example output from turningAngles
- angleListAll - Example output from turningAngles
- disp - Example output from calcDisp
- dispAll - Example output from calcDisp
- distResultsAll - Example output from fitDist
- distResultsExp - Example output from fitDist() using the best-fit dmin for an exponential distribution
- distResultsTrunc - Example output from fitDist
- entropyResults - Example output from entropy
- infomapResult - Example output from infomapCommunities
- occupancyResults - Example output from occupancy
- randomResults - Example output from randomise
- tracks - Sample location data to demonstrate PhysMove functions
- tracksCRW - Sample location data to demonstrate PhysMove functions
Last updated from:0aa7dccf20. Checks:7 NOTE, 2 OK. Indexed: yes.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| linux-devel | NOTE | 229 | ||
| source / vignettes | OK | 278 | ||
| linux-release | NOTE | 203 | ||
| macos-release | NOTE | 189 | ||
| macos-oldrel | NOTE | 149 | ||
| windows-devel | NOTE | 377 | ||
| windows-release | NOTE | 337 | ||
| windows-oldrel | NOTE | 351 | ||
| wasm-release | OK | 186 |
Exports:calcDispcheckTrackscommunityMapcompDistentropyfitDistgyrationRadinfomapCommunitiesoccupancyplotAnglesplotDispPDFplotDistplotPDFplotRandomTracksplotTrackspredictabilityrandomisermsturningAngles
Dependencies:backportsbroomclassclassIntclicpp11DBIdplyre1071farvergenericsggplot2gluegtableisobandKernSmoothlabelinglifecyclemagrittrpillarpkgconfigpoweRlawpracmaproxypurrrR6RColorBrewerRcpprlangrootSolves2S7scalessfstringistringrtibbletidyrtidyselectunitsutf8vctrsviridisLitewithrwk
Last update: 2026-08-05
Started: 2023-11-07
Last update: 2026-08-05
Started: 2023-11-07
Last update: 2026-08-05
Started: 2023-11-07
Last update: 2026-08-05
Started: 2023-11-07